Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cdh11P55288 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Mir686-201ENSMUST00000102174 109 ntBASIC11.32□□□□□ -0.6
Cdh11P55288 Gm5187-201ENSMUST00000117317 991 ntBASIC11.32□□□□□ -0.6
Cdh11P55288 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.32□□□□□ -0.6
Cdh11P55288 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.32□□□□□ -0.6
Cdh11P55288 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdh11P55288 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdh11P55288 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.32□□□□□ -0.6
Cdh11P55288 Gm37497-201ENSMUST00000195830 798 ntBASIC11.32□□□□□ -0.6
Cdh11P55288 Gm44069-201ENSMUST00000204898 506 ntBASIC11.32□□□□□ -0.6
Cdh11P55288 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Cdh11P55288 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.32□□□□□ -0.6
Cdh11P55288 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdh11P55288 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.32□□□□□ -0.6
Cdh11P55288 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.32□□□□□ -0.6
Cdh11P55288 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.32□□□□□ -0.6
Cdh11P55288 Gm10268-201ENSMUST00000085340 555 ntBASIC11.32□□□□□ -0.6
Cdh11P55288 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.32□□□□□ -0.6
Cdh11P55288 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cdh11P55288 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cdh11P55288 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.32□□□□□ -0.6
Cdh11P55288 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Cdh11P55288 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.31□□□□□ -0.6
Cdh11P55288 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cdh11P55288 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.31□□□□□ -0.6
Cdh11P55288 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.31□□□□□ -0.6
Cdh11P55288 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdh11P55288 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Cdh11P55288 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.31□□□□□ -0.6
Cdh11P55288 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.31□□□□□ -0.6
Cdh11P55288 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.31□□□□□ -0.6
Cdh11P55288 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.31□□□□□ -0.6
Cdh11P55288 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdh11P55288 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdh11P55288 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.31□□□□□ -0.6
Cdh11P55288 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdh11P55288 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdh11P55288 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdh11P55288 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Cdh11P55288 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Cdh11P55288 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdh11P55288 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.31□□□□□ -0.6
Cdh11P55288 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh11P55288 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cdh11P55288 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Cdh11P55288 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.3□□□□□ -0.6
Cdh11P55288 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms