Protein–RNA interactions for Protein: P54728

Rad23b, UV excision repair protein RAD23 homolog B, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad23bP54728 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC15.33■□□□□ 0.04
Rad23bP54728 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC15.33■□□□□ 0.04
Rad23bP54728 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.33■□□□□ 0.04
Rad23bP54728 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC15.33■□□□□ 0.04
Rad23bP54728 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Gm10288-201ENSMUST00000084614 537 ntBASIC15.33■□□□□ 0.04
Rad23bP54728 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Rad23bP54728 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.33■□□□□ 0.04
Rad23bP54728 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rad23bP54728 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rad23bP54728 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rad23bP54728 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.32■□□□□ 0.04
Rad23bP54728 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.32■□□□□ 0.04
Rad23bP54728 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.32■□□□□ 0.04
Rad23bP54728 Gm5100-201ENSMUST00000195631 589 ntBASIC15.32■□□□□ 0.04
Rad23bP54728 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC15.32■□□□□ 0.04
Rad23bP54728 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Rad23bP54728 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rad23bP54728 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rad23bP54728 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.32■□□□□ 0.04
Rad23bP54728 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rad23bP54728 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 Gm37859-201ENSMUST00000195529 2173 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rad23bP54728 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rad23bP54728 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rad23bP54728 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rad23bP54728 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rad23bP54728 Gm26013-201ENSMUST00000104404 119 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 Gm14274-201ENSMUST00000117182 615 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 Gm15595-201ENSMUST00000120840 961 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 Gm12291-201ENSMUST00000121627 311 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rad23bP54728 Gm26989-201ENSMUST00000182608 749 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 Gm8531-201ENSMUST00000188319 893 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 Gm29410-201ENSMUST00000188383 694 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 Gm45527-201ENSMUST00000211052 774 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 Gm45594-201ENSMUST00000211717 241 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rad23bP54728 Mir339-201ENSMUST00000083659 96 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rad23bP54728 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rad23bP54728 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 Gm15784-201ENSMUST00000120260 1462 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.31■□□□□ 0.04
Rad23bP54728 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rad23bP54728 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Rad23bP54728 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rad23bP54728 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rad23bP54728 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rad23bP54728 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rad23bP54728 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
Rad23bP54728 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC15.3■□□□□ 0.04
Rad23bP54728 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC15.3■□□□□ 0.04
Rad23bP54728 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC15.3■□□□□ 0.04
Rad23bP54728 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms