Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.62■□□□□ 0.09
Msh6P54276 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC15.62■□□□□ 0.09
Msh6P54276 Gm12164-201ENSMUST00000121695 551 ntBASIC15.62■□□□□ 0.09
Msh6P54276 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Msh6P54276 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Mir6958-201ENSMUST00000184207 73 ntBASIC15.62■□□□□ 0.09
Msh6P54276 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Gm44882-201ENSMUST00000205702 802 ntBASIC15.62■□□□□ 0.09
Msh6P54276 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Msh6P54276 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.62■□□□□ 0.09
Msh6P54276 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.62■□□□□ 0.09
Msh6P54276 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Msh6P54276 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.62■□□□□ 0.09
Msh6P54276 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.62■□□□□ 0.09
Msh6P54276 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.62■□□□□ 0.09
Msh6P54276 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.62■□□□□ 0.09
Msh6P54276 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.62■□□□□ 0.09
Msh6P54276 Gm3332-201ENSMUST00000189337 928 ntBASIC15.62■□□□□ 0.09
Msh6P54276 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh6P54276 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.62■□□□□ 0.09
Msh6P54276 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
Msh6P54276 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.61■□□□□ 0.09
Msh6P54276 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Msh6P54276 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.61■□□□□ 0.09
Msh6P54276 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Msh6P54276 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
Msh6P54276 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Msh6P54276 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
Msh6P54276 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.61■□□□□ 0.09
Msh6P54276 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.61■□□□□ 0.09
Msh6P54276 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC15.61■□□□□ 0.09
Msh6P54276 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.61■□□□□ 0.09
Msh6P54276 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Msh6P54276 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Msh6P54276 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Gm10774-201ENSMUST00000188689 204 ntBASIC15.61■□□□□ 0.09
Msh6P54276 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.61■□□□□ 0.09
Msh6P54276 Gm44124-201ENSMUST00000204159 472 ntBASIC15.61■□□□□ 0.09
Msh6P54276 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.61■□□□□ 0.09
Msh6P54276 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.61■□□□□ 0.09
Msh6P54276 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC15.61■□□□□ 0.09
Msh6P54276 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh6P54276 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Msh6P54276 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Gm44758-201ENSMUST00000206096 2068 ntBASIC15.6■□□□□ 0.09
Msh6P54276 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC15.6■□□□□ 0.09
Msh6P54276 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.6■□□□□ 0.09
Msh6P54276 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms