Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Atxn1P54254 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Gm6963-201ENSMUST00000147879 379 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.34□□□□□ -0.43
Atxn1P54254 Gm29615-201ENSMUST00000185371 697 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Gm28224-201ENSMUST00000186078 697 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Gm29001-201ENSMUST00000186177 697 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Gm28292-201ENSMUST00000186593 697 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Gm28101-201ENSMUST00000187608 697 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Gm29076-201ENSMUST00000187689 697 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Gm28302-201ENSMUST00000187931 697 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Gm28646-201ENSMUST00000188220 697 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Gm28205-201ENSMUST00000189177 697 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Gm29032-201ENSMUST00000189797 697 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Gm28695-201ENSMUST00000190300 697 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Gm32999-201ENSMUST00000192693 562 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Gm37448-201ENSMUST00000192795 697 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.34□□□□□ -0.43
Atxn1P54254 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.34□□□□□ -0.43
Atxn1P54254 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Atxn1P54254 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Atxn1P54254 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Atxn1P54254 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Atxn1P54254 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
Atxn1P54254 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.33□□□□□ -0.44
Atxn1P54254 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.33□□□□□ -0.44
Atxn1P54254 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Gm12380-201ENSMUST00000119012 544 ntBASIC12.33□□□□□ -0.44
Atxn1P54254 Gm14704-201ENSMUST00000120300 874 ntBASIC12.33□□□□□ -0.44
Atxn1P54254 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.33□□□□□ -0.44
Atxn1P54254 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.33□□□□□ -0.44
Atxn1P54254 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Atxn1P54254 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.33□□□□□ -0.44
Atxn1P54254 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Atxn1P54254 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Atxn1P54254 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Atxn1P54254 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atxn1P54254 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.32□□□□□ -0.44
Atxn1P54254 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Atxn1P54254 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Atxn1P54254 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Atxn1P54254 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Atxn1P54254 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.32□□□□□ -0.44
Atxn1P54254 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.32□□□□□ -0.44
Atxn1P54254 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.32□□□□□ -0.44
Atxn1P54254 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.32□□□□□ -0.44
Atxn1P54254 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.32□□□□□ -0.44
Atxn1P54254 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.32□□□□□ -0.44
Atxn1P54254 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.32□□□□□ -0.44
Atxn1P54254 Gm28324-201ENSMUST00000187913 264 ntBASIC12.32□□□□□ -0.44
Atxn1P54254 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.32□□□□□ -0.44
Atxn1P54254 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Atxn1P54254 Gm17889-201ENSMUST00000198410 598 ntBASIC12.32□□□□□ -0.44
Atxn1P54254 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.32□□□□□ -0.44
Atxn1P54254 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms