Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sox1P53783 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox1P53783 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox1P53783 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.65□□□□□ -0.38
Sox1P53783 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sox1P53783 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Gm4868-201ENSMUST00000164138 789 ntBASIC12.65□□□□□ -0.38
Sox1P53783 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox1P53783 Gm7719-201ENSMUST00000182374 975 ntBASIC12.65□□□□□ -0.38
Sox1P53783 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Sox1P53783 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.65□□□□□ -0.38
Sox1P53783 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Sox1P53783 Gm6855-201ENSMUST00000206307 790 ntBASIC12.65□□□□□ -0.38
Sox1P53783 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.65□□□□□ -0.38
Sox1P53783 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox1P53783 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.65□□□□□ -0.38
Sox1P53783 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sox1P53783 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sox1P53783 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox1P53783 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sox1P53783 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.39
Sox1P53783 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.65□□□□□ -0.39
Sox1P53783 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sox1P53783 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox1P53783 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sox1P53783 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.64□□□□□ -0.39
Sox1P53783 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sox1P53783 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sox1P53783 Gm23255-201ENSMUST00000102244 110 ntBASIC12.64□□□□□ -0.39
Sox1P53783 Gm11836-201ENSMUST00000121022 441 ntBASIC12.64□□□□□ -0.39
Sox1P53783 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.64□□□□□ -0.39
Sox1P53783 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox1P53783 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.64□□□□□ -0.39
Sox1P53783 Mir3060-201ENSMUST00000175339 83 ntBASIC12.64□□□□□ -0.39
Sox1P53783 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.64□□□□□ -0.39
Sox1P53783 Gm3551-201ENSMUST00000190750 664 ntBASIC12.64□□□□□ -0.39
Sox1P53783 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox1P53783 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sox1P53783 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sox1P53783 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox1P53783 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sox1P53783 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Sox1P53783 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Sox1P53783 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox1P53783 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Sox1P53783 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms