Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm18968-201ENSMUST00000221319 862 ntBASIC13.67□□□□□ -0.22
Brca1P48754 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Brca1P48754 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Brca1P48754 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.66□□□□□ -0.22
Brca1P48754 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.66□□□□□ -0.22
Brca1P48754 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Gm14942-201ENSMUST00000119642 336 ntBASIC13.66□□□□□ -0.22
Brca1P48754 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Brca1P48754 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Brca1P48754 Gm43912-201ENSMUST00000204352 538 ntBASIC13.66□□□□□ -0.22
Brca1P48754 Gm45500-201ENSMUST00000211676 803 ntBASIC13.66□□□□□ -0.22
Brca1P48754 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.66□□□□□ -0.22
Brca1P48754 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Brca1P48754 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Brca1P48754 Gm23680-201ENSMUST00000083162 164 ntBASIC13.66□□□□□ -0.22
Brca1P48754 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Brca1P48754 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Brca1P48754 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brca1P48754 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Brca1P48754 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.66□□□□□ -0.22
Brca1P48754 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Brca1P48754 Gm25766-201ENSMUST00000104101 131 ntBASIC13.65□□□□□ -0.22
Brca1P48754 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.65□□□□□ -0.22
Brca1P48754 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.65□□□□□ -0.22
Brca1P48754 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.65□□□□□ -0.22
Brca1P48754 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.65□□□□□ -0.22
Brca1P48754 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.65□□□□□ -0.22
Brca1P48754 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.65□□□□□ -0.22
Brca1P48754 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Brca1P48754 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.65□□□□□ -0.22
Brca1P48754 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.65□□□□□ -0.22
Brca1P48754 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Brca1P48754 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brca1P48754 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.65□□□□□ -0.22
Brca1P48754 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.64□□□□□ -0.23
Brca1P48754 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.64□□□□□ -0.23
Brca1P48754 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Brca1P48754 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Gm11979-201ENSMUST00000119629 743 ntBASIC13.64□□□□□ -0.23
Brca1P48754 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Brca1P48754 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.64□□□□□ -0.23
Brca1P48754 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Brca1P48754 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.64□□□□□ -0.23
Brca1P48754 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.64□□□□□ -0.23
Brca1P48754 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.64□□□□□ -0.23
Brca1P48754 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Brca1P48754 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Brca1P48754 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.64□□□□□ -0.23
Brca1P48754 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Brca1P48754 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms