Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.9□□□□□ -0.66
GdnfP48540 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.9□□□□□ -0.66
GdnfP48540 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Gm11803-201ENSMUST00000119966 444 ntBASIC10.9□□□□□ -0.66
GdnfP48540 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.9□□□□□ -0.66
GdnfP48540 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Gm9002-201ENSMUST00000178437 499 ntBASIC10.9□□□□□ -0.66
GdnfP48540 Gm8652-201ENSMUST00000181363 964 ntBASIC10.9□□□□□ -0.66
GdnfP48540 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.9□□□□□ -0.66
GdnfP48540 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.9□□□□□ -0.66
GdnfP48540 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.9□□□□□ -0.66
GdnfP48540 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
GdnfP48540 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
GdnfP48540 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
GdnfP48540 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
GdnfP48540 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
GdnfP48540 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
GdnfP48540 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
GdnfP48540 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.67
GdnfP48540 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
GdnfP48540 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
GdnfP48540 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
GdnfP48540 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
GdnfP48540 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.9□□□□□ -0.67
GdnfP48540 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.89□□□□□ -0.67
GdnfP48540 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
GdnfP48540 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
GdnfP48540 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.89□□□□□ -0.67
GdnfP48540 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.89□□□□□ -0.67
GdnfP48540 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
GdnfP48540 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.89□□□□□ -0.67
GdnfP48540 Gm16202-201ENSMUST00000117532 544 ntBASIC10.89□□□□□ -0.67
GdnfP48540 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.89□□□□□ -0.67
GdnfP48540 Gm8810-201ENSMUST00000172895 754 ntBASIC10.89□□□□□ -0.67
GdnfP48540 Gm27839-201ENSMUST00000184242 106 ntBASIC10.89□□□□□ -0.67
GdnfP48540 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.89□□□□□ -0.67
GdnfP48540 Gm44069-201ENSMUST00000204898 506 ntBASIC10.89□□□□□ -0.67
GdnfP48540 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.89□□□□□ -0.67
GdnfP48540 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.89□□□□□ -0.67
GdnfP48540 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
GdnfP48540 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
GdnfP48540 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.89□□□□□ -0.67
GdnfP48540 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.89□□□□□ -0.67
GdnfP48540 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
GdnfP48540 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms