Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Mir1247-201ENSMUST00000116706 82 ntBASIC12.02□□□□□ -0.49
Rph3aP47708 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.02□□□□□ -0.49
Rph3aP47708 Gm8062-201ENSMUST00000139696 444 ntBASIC12.02□□□□□ -0.49
Rph3aP47708 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.02□□□□□ -0.49
Rph3aP47708 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Rph3aP47708 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.02□□□□□ -0.49
Rph3aP47708 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.02□□□□□ -0.49
Rph3aP47708 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.02□□□□□ -0.49
Rph3aP47708 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rph3aP47708 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.02□□□□□ -0.49
Rph3aP47708 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.02□□□□□ -0.49
Rph3aP47708 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rph3aP47708 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rph3aP47708 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Rph3aP47708 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rph3aP47708 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Rph3aP47708 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rph3aP47708 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.01□□□□□ -0.49
Rph3aP47708 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.01□□□□□ -0.49
Rph3aP47708 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Rph3aP47708 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rph3aP47708 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Gm11964-201ENSMUST00000120982 444 ntBASIC12.01□□□□□ -0.49
Rph3aP47708 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rph3aP47708 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.01□□□□□ -0.49
Rph3aP47708 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.01□□□□□ -0.49
Rph3aP47708 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.01□□□□□ -0.49
Rph3aP47708 Gm38002-201ENSMUST00000193255 180 ntBASIC12.01□□□□□ -0.49
Rph3aP47708 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.01□□□□□ -0.49
Rph3aP47708 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.01□□□□□ -0.49
Rph3aP47708 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.01□□□□□ -0.49
Rph3aP47708 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rph3aP47708 Gm22058-201ENSMUST00000083393 310 ntBASIC12.01□□□□□ -0.49
Rph3aP47708 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.01□□□□□ -0.49
Rph3aP47708 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rph3aP47708 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Rph3aP47708 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rph3aP47708 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rph3aP47708 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rph3aP47708 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rph3aP47708 Gm43823-201ENSMUST00000197391 1808 ntBASIC12□□□□□ -0.49
Rph3aP47708 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rph3aP47708 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rph3aP47708 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rph3aP47708 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rph3aP47708 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12□□□□□ -0.49
Rph3aP47708 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rph3aP47708 Gm6023-201ENSMUST00000118217 606 ntBASIC12□□□□□ -0.49
Rph3aP47708 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12□□□□□ -0.49
Rph3aP47708 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rph3aP47708 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12□□□□□ -0.49
Rph3aP47708 Gm17420-201ENSMUST00000164753 153 ntBASIC12□□□□□ -0.49
Rph3aP47708 Gm8018-201ENSMUST00000173536 789 ntBASIC12□□□□□ -0.49
Rph3aP47708 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rph3aP47708 Gm43133-201ENSMUST00000197472 463 ntBASIC12□□□□□ -0.49
Rph3aP47708 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Rph3aP47708 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rph3aP47708 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12□□□□□ -0.49
Rph3aP47708 Gm45484-201ENSMUST00000210310 1141 ntBASIC12□□□□□ -0.49
Rph3aP47708 Gm45880-201ENSMUST00000213041 853 ntBASIC12□□□□□ -0.49
Rph3aP47708 Gm45925-201ENSMUST00000218882 744 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms