Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.74□□□□□ -0.53
Nkx2-6P43688 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Gm12266-201ENSMUST00000120311 962 ntBASIC11.74□□□□□ -0.53
Nkx2-6P43688 Gm11597-201ENSMUST00000121423 964 ntBASIC11.74□□□□□ -0.53
Nkx2-6P43688 B9d1os-201ENSMUST00000137010 674 ntBASIC11.74□□□□□ -0.53
Nkx2-6P43688 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Gm17040-202ENSMUST00000170597 889 ntBASIC11.74□□□□□ -0.53
Nkx2-6P43688 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Gm43378-201ENSMUST00000199336 582 ntBASIC11.74□□□□□ -0.53
Nkx2-6P43688 Gm3786-201ENSMUST00000202659 378 ntBASIC11.74□□□□□ -0.53
Nkx2-6P43688 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.74□□□□□ -0.53
Nkx2-6P43688 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-6P43688 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Rmrp-201ENSMUST00000157463 271 ntBASIC11.73□□□□□ -0.53
Nkx2-6P43688 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Gm28450-201ENSMUST00000187349 638 ntBASIC11.73□□□□□ -0.53
Nkx2-6P43688 Gm9230-201ENSMUST00000188228 532 ntBASIC11.73□□□□□ -0.53
Nkx2-6P43688 Gm37666-201ENSMUST00000194110 866 ntBASIC11.73□□□□□ -0.53
Nkx2-6P43688 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.73□□□□□ -0.53
Nkx2-6P43688 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.73□□□□□ -0.53
Nkx2-6P43688 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms