Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hist1h1dP43277 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hist1h1dP43277 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Hist1h1dP43277 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hist1h1dP43277 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.49□□□□□ -0.73
Hist1h1dP43277 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hist1h1dP43277 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.49□□□□□ -0.73
Hist1h1dP43277 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.49□□□□□ -0.73
Hist1h1dP43277 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hist1h1dP43277 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.48□□□□□ -0.73
Hist1h1dP43277 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.48□□□□□ -0.73
Hist1h1dP43277 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.48□□□□□ -0.73
Hist1h1dP43277 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Mir6977-201ENSMUST00000184960 64 ntBASIC10.48□□□□□ -0.73
Hist1h1dP43277 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.48□□□□□ -0.73
Hist1h1dP43277 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Gm38092-201ENSMUST00000195600 653 ntBASIC10.48□□□□□ -0.73
Hist1h1dP43277 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.48□□□□□ -0.73
Hist1h1dP43277 Gm19163-201ENSMUST00000223313 780 ntBASIC10.48□□□□□ -0.73
Hist1h1dP43277 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.48□□□□□ -0.73
Hist1h1dP43277 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.48□□□□□ -0.73
Hist1h1dP43277 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hist1h1dP43277 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Gm18018-201ENSMUST00000198273 408 ntBASIC10.47□□□□□ -0.73
Hist1h1dP43277 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.47□□□□□ -0.73
Hist1h1dP43277 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Hist1h1dP43277 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.47□□□□□ -0.73
Hist1h1dP43277 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms