Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Hmx3P42581 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmx3P42581 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmx3P42581 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
Hmx3P42581 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.41□□□□□ -0.74
Hmx3P42581 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.41□□□□□ -0.74
Hmx3P42581 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.41□□□□□ -0.74
Hmx3P42581 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.41□□□□□ -0.74
Hmx3P42581 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.41□□□□□ -0.74
Hmx3P42581 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.41□□□□□ -0.74
Hmx3P42581 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Hmx3P42581 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.41□□□□□ -0.74
Hmx3P42581 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.41□□□□□ -0.74
Hmx3P42581 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.41□□□□□ -0.74
Hmx3P42581 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.41□□□□□ -0.74
Hmx3P42581 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Auts2-212ENSMUST00000178555 309 ntBASIC10.41□□□□□ -0.74
Hmx3P42581 Gm10576-201ENSMUST00000191927 825 ntBASIC10.41□□□□□ -0.74
Hmx3P42581 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.41□□□□□ -0.74
Hmx3P42581 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Hmx3P42581 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Hmx3P42581 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Hmx3P42581 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.41□□□□□ -0.74
Hmx3P42581 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC10.41□□□□□ -0.74
Hmx3P42581 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.41□□□□□ -0.74
Hmx3P42581 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.41□□□□□ -0.74
Hmx3P42581 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.41□□□□□ -0.74
Hmx3P42581 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmx3P42581 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Hmx3P42581 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.41□□□□□ -0.74
Hmx3P42581 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hmx3P42581 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.4□□□□□ -0.74
Hmx3P42581 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Hmx3P42581 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.4□□□□□ -0.74
Hmx3P42581 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.4□□□□□ -0.74
Hmx3P42581 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.4□□□□□ -0.74
Hmx3P42581 Gm38144-201ENSMUST00000192790 465 ntBASIC10.4□□□□□ -0.74
Hmx3P42581 Gm42550-201ENSMUST00000201553 960 ntBASIC10.4□□□□□ -0.74
Hmx3P42581 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.4□□□□□ -0.74
Hmx3P42581 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.4□□□□□ -0.74
Hmx3P42581 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.4□□□□□ -0.74
Hmx3P42581 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Hmx3P42581 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.4□□□□□ -0.74
Hmx3P42581 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hmx3P42581 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.4□□□□□ -0.75
Hmx3P42581 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hmx3P42581 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Hmx3P42581 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.4□□□□□ -0.75
Hmx3P42581 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hmx3P42581 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Hmx3P42581 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Hmx3P42581 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hmx3P42581 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hmx3P42581 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Hmx3P42581 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hmx3P42581 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms