Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC8.34□□□□□ -1.07
Rpl28P41105 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC8.34□□□□□ -1.07
Rpl28P41105 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC8.34□□□□□ -1.07
Rpl28P41105 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Mir7654-201ENSMUST00000185082 70 ntBASIC8.34□□□□□ -1.07
Rpl28P41105 Ighv5-13-201ENSMUST00000193550 290 ntBASIC8.34□□□□□ -1.07
Rpl28P41105 Gm8515-201ENSMUST00000194852 576 ntBASIC8.34□□□□□ -1.07
Rpl28P41105 AL593843.1-201ENSMUST00000195891 145 ntBASIC8.34□□□□□ -1.07
Rpl28P41105 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 AC134335.2-201ENSMUST00000227660 440 ntBASIC8.34□□□□□ -1.07
Rpl28P41105 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Rpl28P41105 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC8.34□□□□□ -1.07
Rpl28P41105 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl28P41105 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
Rpl28P41105 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Rpl28P41105 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Rpl28P41105 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.08
Rpl28P41105 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Gm15991-202ENSMUST00000212123 3565 ntBASIC8.33□□□□□ -1.08
Rpl28P41105 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Rpl28P41105 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Rpl28P41105 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC8.33□□□□□ -1.08
Rpl28P41105 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC8.33□□□□□ -1.08
Rpl28P41105 Gm11400-201ENSMUST00000120853 1214 ntBASIC8.33□□□□□ -1.08
Rpl28P41105 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC8.33□□□□□ -1.08
Rpl28P41105 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC8.33□□□□□ -1.08
Rpl28P41105 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC8.33□□□□□ -1.08
Rpl28P41105 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC8.33□□□□□ -1.08
Rpl28P41105 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Rpl28P41105 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
Rpl28P41105 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Gm18018-201ENSMUST00000198273 408 ntBASIC8.33□□□□□ -1.08
Rpl28P41105 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Rpl28P41105 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC8.33□□□□□ -1.08
Rpl28P41105 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC8.33□□□□□ -1.08
Rpl28P41105 AC154517.2-201ENSMUST00000220829 2458 ntBASIC8.33□□□□□ -1.08
Rpl28P41105 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC8.33□□□□□ -1.08
Rpl28P41105 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Rpl28P41105 AC096628.2-201ENSMUST00000225443 1413 ntBASIC8.33□□□□□ -1.08
Rpl28P41105 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Gm2423-201ENSMUST00000074863 733 ntBASIC8.33□□□□□ -1.08
Rpl28P41105 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rpl28P41105 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Rpl28P41105 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rpl28P41105 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl28P41105 AC130671.2-201ENSMUST00000227224 1621 ntBASIC8.32□□□□□ -1.08
Rpl28P41105 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms