Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox6P40645 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.67□□□□□ -0.54
Sox6P40645 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Sox6P40645 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sox6P40645 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox6P40645 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.67□□□□□ -0.54
Sox6P40645 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sox6P40645 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox6P40645 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Sox6P40645 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.66□□□□□ -0.54
Sox6P40645 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sox6P40645 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.66□□□□□ -0.54
Sox6P40645 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Sox6P40645 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.66□□□□□ -0.54
Sox6P40645 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sox6P40645 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox6P40645 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox6P40645 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Sox6P40645 Gm13123-201ENSMUST00000122173 492 ntBASIC11.66□□□□□ -0.54
Sox6P40645 Gm2231-201ENSMUST00000125661 612 ntBASIC11.66□□□□□ -0.54
Sox6P40645 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox6P40645 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.66□□□□□ -0.54
Sox6P40645 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.66□□□□□ -0.54
Sox6P40645 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Sox6P40645 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox6P40645 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Sox6P40645 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox6P40645 Gm5186-201ENSMUST00000218781 920 ntBASIC11.66□□□□□ -0.54
Sox6P40645 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox6P40645 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Sox6P40645 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sox6P40645 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox6P40645 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox6P40645 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.66□□□□□ -0.54
Sox6P40645 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Sox6P40645 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sox6P40645 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox6P40645 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sox6P40645 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sox6P40645 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sox6P40645 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Gm8805-201ENSMUST00000117848 313 ntBASIC11.65□□□□□ -0.54
Sox6P40645 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.65□□□□□ -0.54
Sox6P40645 Gm26185-201ENSMUST00000157692 266 ntBASIC11.65□□□□□ -0.54
Sox6P40645 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox6P40645 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Gm4271-201ENSMUST00000174444 973 ntBASIC11.65□□□□□ -0.54
Sox6P40645 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sox6P40645 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Gm6266-201ENSMUST00000203844 806 ntBASIC11.65□□□□□ -0.54
Sox6P40645 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.65□□□□□ -0.54
Sox6P40645 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox6P40645 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox6P40645 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sox6P40645 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox6P40645 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox6P40645 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms