Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Chd1P40201 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chd1P40201 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chd1P40201 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chd1P40201 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chd1P40201 Gm10176-201ENSMUST00000159707 2264 ntBASIC18.14■□□□□ 0.5
Chd1P40201 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chd1P40201 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1P40201 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1P40201 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1P40201 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1P40201 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Chd1P40201 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1P40201 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1P40201 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1P40201 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1P40201 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1P40201 Gm44152-201ENSMUST00000205007 1691 ntBASIC18.14■□□□□ 0.49
Chd1P40201 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Chd1P40201 Gm23769-201ENSMUST00000104441 121 ntBASIC18.14■□□□□ 0.49
Chd1P40201 Gm12129-201ENSMUST00000120104 1147 ntBASIC18.14■□□□□ 0.49
Chd1P40201 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1P40201 Gm4462-201ENSMUST00000166453 492 ntBASIC18.14■□□□□ 0.49
Chd1P40201 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC18.14■□□□□ 0.49
Chd1P40201 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Chd1P40201 Gm20495-201ENSMUST00000173902 235 ntBASIC18.14■□□□□ 0.49
Chd1P40201 Gm5468-202ENSMUST00000227851 682 ntBASIC18.14■□□□□ 0.49
Chd1P40201 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.14■□□□□ 0.49
Chd1P40201 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Chd1P40201 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Chd1P40201 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Chd1P40201 Gm44260-201ENSMUST00000204946 2094 ntBASIC18.13■□□□□ 0.49
Chd1P40201 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Chd1P40201 Gm44414-201ENSMUST00000203660 2109 ntBASIC18.13■□□□□ 0.49
Chd1P40201 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.13■□□□□ 0.49
Chd1P40201 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1P40201 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1P40201 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1P40201 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Chd1P40201 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC18.13■□□□□ 0.49
Chd1P40201 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1P40201 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1P40201 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC18.13■□□□□ 0.49
Chd1P40201 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC18.13■□□□□ 0.49
Chd1P40201 Gm9369-201ENSMUST00000196009 733 ntBASIC18.13■□□□□ 0.49
Chd1P40201 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC18.13■□□□□ 0.49
Chd1P40201 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chd1P40201 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chd1P40201 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1P40201 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1P40201 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1P40201 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Chd1P40201 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1P40201 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1P40201 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1P40201 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Gm4294-201ENSMUST00000105169 614 ntBASIC18.12■□□□□ 0.49
Chd1P40201 Gm18123-201ENSMUST00000210874 822 ntBASIC18.12■□□□□ 0.49
Chd1P40201 AC129975.1-201ENSMUST00000224816 592 ntBASIC18.12■□□□□ 0.49
Chd1P40201 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Gm42432-201ENSMUST00000197902 1617 ntBASIC18.12■□□□□ 0.49
Chd1P40201 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Gm14497-201ENSMUST00000119537 580 ntBASIC18.12■□□□□ 0.49
Chd1P40201 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC18.12■□□□□ 0.49
Chd1P40201 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC18.12■□□□□ 0.49
Chd1P40201 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC18.12■□□□□ 0.49
Chd1P40201 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Gm5982-201ENSMUST00000196234 512 ntBASIC18.12■□□□□ 0.49
Chd1P40201 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 AC156790.2-201ENSMUST00000227115 568 ntBASIC18.12■□□□□ 0.49
Chd1P40201 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1P40201 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1P40201 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1P40201 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1P40201 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1P40201 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Chd1P40201 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1P40201 Gm15528-201ENSMUST00000117821 864 ntBASIC18.11■□□□□ 0.49
Chd1P40201 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1P40201 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC18.11■□□□□ 0.49
Chd1P40201 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC18.11■□□□□ 0.49
Chd1P40201 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1P40201 Mir6953-201ENSMUST00000184745 68 ntBASIC18.11■□□□□ 0.49
Chd1P40201 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Chd1P40201 Gm10580-201ENSMUST00000097985 396 ntBASIC18.11■□□□□ 0.49
Chd1P40201 Gm10582-201ENSMUST00000097987 396 ntBASIC18.11■□□□□ 0.49
Chd1P40201 Gm10583-201ENSMUST00000097988 396 ntBASIC18.11■□□□□ 0.49
Chd1P40201 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1P40201 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms