Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
LdlrP35951 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LdlrP35951 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
LdlrP35951 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.35□□□□□ -0.43
LdlrP35951 Gm13123-201ENSMUST00000122173 492 ntBASIC12.35□□□□□ -0.43
LdlrP35951 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.35□□□□□ -0.43
LdlrP35951 Gm22121-201ENSMUST00000175148 54 ntBASIC12.35□□□□□ -0.43
LdlrP35951 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.35□□□□□ -0.43
LdlrP35951 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.35□□□□□ -0.43
LdlrP35951 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LdlrP35951 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.35□□□□□ -0.43
LdlrP35951 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LdlrP35951 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.35□□□□□ -0.43
LdlrP35951 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LdlrP35951 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LdlrP35951 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.34□□□□□ -0.43
LdlrP35951 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
LdlrP35951 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.34□□□□□ -0.43
LdlrP35951 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.34□□□□□ -0.43
LdlrP35951 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Gm8805-201ENSMUST00000117848 313 ntBASIC12.34□□□□□ -0.43
LdlrP35951 Gm12203-201ENSMUST00000118235 598 ntBASIC12.34□□□□□ -0.43
LdlrP35951 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Gm12209-201ENSMUST00000120089 596 ntBASIC12.34□□□□□ -0.43
LdlrP35951 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.34□□□□□ -0.43
LdlrP35951 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.34□□□□□ -0.43
LdlrP35951 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.34□□□□□ -0.43
LdlrP35951 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
LdlrP35951 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.34□□□□□ -0.43
LdlrP35951 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.34□□□□□ -0.43
LdlrP35951 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.34□□□□□ -0.43
LdlrP35951 Gm23363-201ENSMUST00000175024 79 ntBASIC12.34□□□□□ -0.43
LdlrP35951 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.34□□□□□ -0.43
LdlrP35951 Gm27516-201ENSMUST00000184237 98 ntBASIC12.34□□□□□ -0.43
LdlrP35951 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.34□□□□□ -0.43
LdlrP35951 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.34□□□□□ -0.43
LdlrP35951 Gm42627-201ENSMUST00000197347 224 ntBASIC12.34□□□□□ -0.43
LdlrP35951 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Gm8099-201ENSMUST00000200510 742 ntBASIC12.34□□□□□ -0.43
LdlrP35951 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.34□□□□□ -0.43
LdlrP35951 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
LdlrP35951 Snora73a-201ENSMUST00000082453 205 ntBASIC12.34□□□□□ -0.43
LdlrP35951 Gm24526-201ENSMUST00000082921 158 ntBASIC12.34□□□□□ -0.43
LdlrP35951 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LdlrP35951 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.34□□□□□ -0.43
LdlrP35951 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.34□□□□□ -0.43
LdlrP35951 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LdlrP35951 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LdlrP35951 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms