Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.41□□□□□ -0.58
Nedd8P29595 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.41□□□□□ -0.58
Nedd8P29595 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.41□□□□□ -0.58
Nedd8P29595 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.41□□□□□ -0.58
Nedd8P29595 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.41□□□□□ -0.58
Nedd8P29595 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.41□□□□□ -0.58
Nedd8P29595 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Nedd8P29595 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.41□□□□□ -0.58
Nedd8P29595 Gm6458-201ENSMUST00000211573 635 ntBASIC11.41□□□□□ -0.58
Nedd8P29595 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.41□□□□□ -0.58
Nedd8P29595 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.41□□□□□ -0.58
Nedd8P29595 Gm26315-201ENSMUST00000083890 321 ntBASIC11.41□□□□□ -0.58
Nedd8P29595 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.41□□□□□ -0.58
Nedd8P29595 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Nedd8P29595 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Nedd8P29595 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nedd8P29595 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nedd8P29595 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.41□□□□□ -0.58
Nedd8P29595 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nedd8P29595 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Nedd8P29595 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Nedd8P29595 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.4□□□□□ -0.58
Nedd8P29595 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Nedd8P29595 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.4□□□□□ -0.58
Nedd8P29595 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.4□□□□□ -0.58
Nedd8P29595 Gm12291-201ENSMUST00000121627 311 ntBASIC11.4□□□□□ -0.58
Nedd8P29595 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.4□□□□□ -0.58
Nedd8P29595 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.4□□□□□ -0.58
Nedd8P29595 Gm3436-201ENSMUST00000179930 840 ntBASIC11.4□□□□□ -0.58
Nedd8P29595 Mir6990-201ENSMUST00000183724 91 ntBASIC11.4□□□□□ -0.58
Nedd8P29595 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.4□□□□□ -0.58
Nedd8P29595 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.4□□□□□ -0.58
Nedd8P29595 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Nedd8P29595 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Nedd8P29595 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.4□□□□□ -0.58
Nedd8P29595 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nedd8P29595 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Nedd8P29595 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nedd8P29595 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nedd8P29595 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nedd8P29595 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nedd8P29595 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Nedd8P29595 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Nedd8P29595 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Nedd8P29595 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Nedd8P29595 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Gm6415-201ENSMUST00000118488 348 ntBASIC11.39□□□□□ -0.59
Nedd8P29595 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.39□□□□□ -0.59
Nedd8P29595 Gm24158-201ENSMUST00000175263 71 ntBASIC11.39□□□□□ -0.59
Nedd8P29595 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Gm43703-201ENSMUST00000200523 763 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms