Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.77□□□□□ -0.37
Nfkb1P25799 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nfkb1P25799 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Nfkb1P25799 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.77□□□□□ -0.37
Nfkb1P25799 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nfkb1P25799 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nfkb1P25799 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Gm24231-201ENSMUST00000104315 133 ntBASIC12.76□□□□□ -0.37
Nfkb1P25799 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Nfkb1P25799 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Nfkb1P25799 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.76□□□□□ -0.37
Nfkb1P25799 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.76□□□□□ -0.37
Nfkb1P25799 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Nfkb1P25799 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.76□□□□□ -0.37
Nfkb1P25799 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.76□□□□□ -0.37
Nfkb1P25799 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.76□□□□□ -0.37
Nfkb1P25799 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.76□□□□□ -0.37
Nfkb1P25799 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Nfkb1P25799 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Nfkb1P25799 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.76□□□□□ -0.37
Nfkb1P25799 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.76□□□□□ -0.37
Nfkb1P25799 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nfkb1P25799 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Nfkb1P25799 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.75□□□□□ -0.37
Nfkb1P25799 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Gm12217-201ENSMUST00000118858 696 ntBASIC12.75□□□□□ -0.37
Nfkb1P25799 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Nfkb1P25799 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.75□□□□□ -0.37
Nfkb1P25799 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.75□□□□□ -0.37
Nfkb1P25799 Gm18753-201ENSMUST00000201000 566 ntBASIC12.75□□□□□ -0.37
Nfkb1P25799 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Gm45598-202ENSMUST00000210719 986 ntBASIC12.75□□□□□ -0.37
Nfkb1P25799 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Nfkb1P25799 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Nfkb1P25799 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nfkb1P25799 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.74□□□□□ -0.37
Nfkb1P25799 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms