Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Hoxd8P23463 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Gm16107-201ENSMUST00000162523 862 ntBASIC12.79□□□□□ -0.36
Hoxd8P23463 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Gm28923-201ENSMUST00000187755 322 ntBASIC12.79□□□□□ -0.36
Hoxd8P23463 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Ginm1-202ENSMUST00000065124 300 ntBASIC12.79□□□□□ -0.36
Hoxd8P23463 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxd8P23463 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxd8P23463 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxd8P23463 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Gm43339-201ENSMUST00000200032 1606 ntBASIC12.78□□□□□ -0.36
Hoxd8P23463 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxd8P23463 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hoxd8P23463 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Gm5419-201ENSMUST00000119301 527 ntBASIC12.78□□□□□ -0.36
Hoxd8P23463 Gm15432-201ENSMUST00000121106 195 ntBASIC12.78□□□□□ -0.36
Hoxd8P23463 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC12.78□□□□□ -0.36
Hoxd8P23463 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Gm45696-201ENSMUST00000212088 985 ntBASIC12.78□□□□□ -0.36
Hoxd8P23463 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.78□□□□□ -0.36
Hoxd8P23463 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hoxd8P23463 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hoxd8P23463 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hoxd8P23463 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Hoxd8P23463 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxd8P23463 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
Hoxd8P23463 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxd8P23463 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxd8P23463 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxd8P23463 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Hoxd8P23463 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Hoxd8P23463 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxd8P23463 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Hoxd8P23463 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Hoxd8P23463 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxd8P23463 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxd8P23463 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxd8P23463 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Hoxd8P23463 Gm11340-201ENSMUST00000119226 412 ntBASIC12.77□□□□□ -0.37
Hoxd8P23463 Gm14913-201ENSMUST00000120011 1093 ntBASIC12.77□□□□□ -0.37
Hoxd8P23463 Gm8199-201ENSMUST00000121323 823 ntBASIC12.77□□□□□ -0.37
Hoxd8P23463 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms