Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
BdnfP21237 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.93□□□□□ -0.5
BdnfP21237 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.93□□□□□ -0.5
BdnfP21237 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
BdnfP21237 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.92□□□□□ -0.5
BdnfP21237 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.92□□□□□ -0.5
BdnfP21237 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
BdnfP21237 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.92□□□□□ -0.5
BdnfP21237 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.92□□□□□ -0.5
BdnfP21237 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
BdnfP21237 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
BdnfP21237 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.92□□□□□ -0.5
BdnfP21237 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Gm26185-201ENSMUST00000157692 266 ntBASIC11.92□□□□□ -0.5
BdnfP21237 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.92□□□□□ -0.5
BdnfP21237 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Gm27892-201ENSMUST00000185017 106 ntBASIC11.92□□□□□ -0.5
BdnfP21237 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.92□□□□□ -0.5
BdnfP21237 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
BdnfP21237 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Gm10012-201ENSMUST00000078252 192 ntBASIC11.92□□□□□ -0.5
BdnfP21237 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
BdnfP21237 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
BdnfP21237 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
BdnfP21237 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
BdnfP21237 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
BdnfP21237 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
BdnfP21237 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.91□□□□□ -0.5
BdnfP21237 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
BdnfP21237 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
BdnfP21237 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.91□□□□□ -0.5
BdnfP21237 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.91□□□□□ -0.5
BdnfP21237 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
BdnfP21237 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
BdnfP21237 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.91□□□□□ -0.5
BdnfP21237 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Mir1894-201ENSMUST00000122802 81 ntBASIC11.91□□□□□ -0.5
BdnfP21237 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.91□□□□□ -0.5
BdnfP21237 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.91□□□□□ -0.5
BdnfP21237 Gm17208-201ENSMUST00000168388 535 ntBASIC11.91□□□□□ -0.5
BdnfP21237 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.91□□□□□ -0.5
BdnfP21237 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.91□□□□□ -0.5
BdnfP21237 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.91□□□□□ -0.5
BdnfP21237 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.91□□□□□ -0.5
BdnfP21237 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.91□□□□□ -0.5
BdnfP21237 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.91□□□□□ -0.5
BdnfP21237 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.91□□□□□ -0.5
BdnfP21237 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Gm10146-201ENSMUST00000072739 309 ntBASIC11.91□□□□□ -0.5
BdnfP21237 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
BdnfP21237 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.91□□□□□ -0.5
BdnfP21237 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
BdnfP21237 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.91□□□□□ -0.5
BdnfP21237 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms