Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm13492-201ENSMUST00000119772 665 ntBASIC11.71□□□□□ -0.53
TP20293 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Gm24548-201ENSMUST00000158650 108 ntBASIC11.71□□□□□ -0.53
TP20293 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
TP20293 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.71□□□□□ -0.53
TP20293 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.71□□□□□ -0.53
TP20293 Gm37008-201ENSMUST00000195712 319 ntBASIC11.71□□□□□ -0.53
TP20293 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.71□□□□□ -0.53
TP20293 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.71□□□□□ -0.53
TP20293 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.71□□□□□ -0.53
TP20293 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
TP20293 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.71□□□□□ -0.53
TP20293 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
TP20293 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
TP20293 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TP20293 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.71□□□□□ -0.54
TP20293 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TP20293 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
TP20293 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TP20293 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.71□□□□□ -0.54
TP20293 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
TP20293 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TP20293 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TP20293 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.71□□□□□ -0.54
TP20293 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TP20293 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TP20293 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
TP20293 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TP20293 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.71□□□□□ -0.54
TP20293 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TP20293 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
TP20293 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.7□□□□□ -0.54
TP20293 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.7□□□□□ -0.54
TP20293 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TP20293 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.7□□□□□ -0.54
TP20293 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.7□□□□□ -0.54
TP20293 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.7□□□□□ -0.54
TP20293 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.7□□□□□ -0.54
TP20293 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TP20293 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TP20293 Gm19184-201ENSMUST00000196798 928 ntBASIC11.7□□□□□ -0.54
TP20293 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.7□□□□□ -0.54
TP20293 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.7□□□□□ -0.54
TP20293 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TP20293 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TP20293 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.7□□□□□ -0.54
TP20293 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
TP20293 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.7□□□□□ -0.54
TP20293 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TP20293 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
TP20293 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TP20293 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
TP20293 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TP20293 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TP20293 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
TP20293 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TP20293 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TP20293 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TP20293 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TP20293 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TP20293 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.69□□□□□ -0.54
TP20293 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TP20293 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.69□□□□□ -0.54
TP20293 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.69□□□□□ -0.54
TP20293 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.69□□□□□ -0.54
TP20293 Gm8062-201ENSMUST00000139696 444 ntBASIC11.69□□□□□ -0.54
TP20293 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms