Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.24□□□□□ -0.45
Srp54P14576 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Srp54P14576 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54P14576 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.23□□□□□ -0.45
Srp54P14576 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Srp54P14576 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Srp54P14576 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Srp54P14576 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Srp54P14576 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Srp54P14576 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Srp54P14576 Gm28882-201ENSMUST00000185504 314 ntBASIC12.23□□□□□ -0.45
Srp54P14576 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.23□□□□□ -0.45
Srp54P14576 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Srp54P14576 Gm45186-201ENSMUST00000206874 478 ntBASIC12.23□□□□□ -0.45
Srp54P14576 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.23□□□□□ -0.45
Srp54P14576 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54P14576 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Srp54P14576 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Srp54P14576 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Srp54P14576 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.22□□□□□ -0.45
Srp54P14576 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Srp54P14576 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.22□□□□□ -0.45
Srp54P14576 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Srp54P14576 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Srp54P14576 Gm12314-201ENSMUST00000118104 538 ntBASIC12.22□□□□□ -0.45
Srp54P14576 Gm14832-201ENSMUST00000121289 322 ntBASIC12.22□□□□□ -0.45
Srp54P14576 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.22□□□□□ -0.45
Srp54P14576 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Srp54P14576 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.22□□□□□ -0.45
Srp54P14576 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Gm26361-201ENSMUST00000158868 186 ntBASIC12.22□□□□□ -0.45
Srp54P14576 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.22□□□□□ -0.45
Srp54P14576 Gm18212-201ENSMUST00000211678 889 ntBASIC12.22□□□□□ -0.45
Srp54P14576 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.22□□□□□ -0.45
Srp54P14576 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Srp54P14576 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Srp54P14576 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Srp54P14576 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Srp54P14576 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Srp54P14576 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Srp54P14576 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Srp54P14576 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54P14576 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Srp54P14576 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms