Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.97□□□□□ -0.49
Fv4P11370 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Fv4P11370 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.97□□□□□ -0.49
Fv4P11370 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.97□□□□□ -0.49
Fv4P11370 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Fv4P11370 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.97□□□□□ -0.49
Fv4P11370 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.97□□□□□ -0.49
Fv4P11370 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Fv4P11370 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Fv4P11370 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.97□□□□□ -0.49
Fv4P11370 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Fv4P11370 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.97□□□□□ -0.49
Fv4P11370 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Fv4P11370 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.97□□□□□ -0.49
Fv4P11370 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.97□□□□□ -0.49
Fv4P11370 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.97□□□□□ -0.49
Fv4P11370 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.97□□□□□ -0.49
Fv4P11370 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Fv4P11370 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Fv4P11370 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Fv4P11370 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Fv4P11370 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Fv4P11370 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fv4P11370 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Fv4P11370 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.96□□□□□ -0.49
Fv4P11370 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.96□□□□□ -0.49
Fv4P11370 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Fv4P11370 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.96□□□□□ -0.49
Fv4P11370 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.96□□□□□ -0.49
Fv4P11370 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Gm13736-201ENSMUST00000119272 253 ntBASIC11.96□□□□□ -0.49
Fv4P11370 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.96□□□□□ -0.49
Fv4P11370 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.96□□□□□ -0.49
Fv4P11370 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Gm7809-201ENSMUST00000153199 742 ntBASIC11.96□□□□□ -0.49
Fv4P11370 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.96□□□□□ -0.49
Fv4P11370 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.96□□□□□ -0.49
Fv4P11370 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Gm25927-201ENSMUST00000175058 117 ntBASIC11.96□□□□□ -0.49
Fv4P11370 Gm3890-201ENSMUST00000182416 207 ntBASIC11.96□□□□□ -0.49
Fv4P11370 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Fv4P11370 Gm44958-201ENSMUST00000203734 736 ntBASIC11.96□□□□□ -0.49
Fv4P11370 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.96□□□□□ -0.49
Fv4P11370 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.96□□□□□ -0.49
Fv4P11370 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Fv4P11370 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fv4P11370 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Fv4P11370 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Fv4P11370 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.5
Fv4P11370 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Fv4P11370 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.96□□□□□ -0.5
Fv4P11370 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fv4P11370 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fv4P11370 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.96□□□□□ -0.5
Fv4P11370 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fv4P11370 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fv4P11370 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fv4P11370 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.96□□□□□ -0.5
Fv4P11370 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fv4P11370 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fv4P11370 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fv4P11370 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fv4P11370 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fv4P11370 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fv4P11370 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fv4P11370 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fv4P11370 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Fv4P11370 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fv4P11370 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.95□□□□□ -0.5
Fv4P11370 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fv4P11370 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms