Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.47□□□□□ -0.89
Fn1P11276 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Fn1P11276 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Fn1P11276 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Fn1P11276 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.47□□□□□ -0.89
Fn1P11276 Gm20694-201ENSMUST00000176943 404 ntBASIC9.47□□□□□ -0.89
Fn1P11276 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.47□□□□□ -0.89
Fn1P11276 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.47□□□□□ -0.89
Fn1P11276 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.47□□□□□ -0.89
Fn1P11276 AC187103.3-201ENSMUST00000225725 646 ntBASIC9.47□□□□□ -0.89
Fn1P11276 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Fn1P11276 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Fn1P11276 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.47□□□□□ -0.89
Fn1P11276 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Fn1P11276 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.47□□□□□ -0.89
Fn1P11276 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Fn1P11276 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Fn1P11276 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Fn1P11276 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Fn1P11276 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC9.46□□□□□ -0.89
Fn1P11276 Gm24279-201ENSMUST00000104236 131 ntBASIC9.46□□□□□ -0.89
Fn1P11276 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Fn1P11276 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Fn1P11276 Gm24809-201ENSMUST00000175318 271 ntBASIC9.46□□□□□ -0.89
Fn1P11276 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.89
Fn1P11276 Gm42430-201ENSMUST00000197209 616 ntBASIC9.46□□□□□ -0.89
Fn1P11276 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Fn1P11276 Gm43997-201ENSMUST00000203986 1005 ntBASIC9.46□□□□□ -0.89
Fn1P11276 Gm9204-201ENSMUST00000212641 947 ntBASIC9.46□□□□□ -0.89
Fn1P11276 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.46□□□□□ -0.89
Fn1P11276 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Fn1P11276 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Fn1P11276 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Fn1P11276 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Fn1P11276 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Fn1P11276 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.89
Fn1P11276 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Fn1P11276 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Fn1P11276 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Fn1P11276 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Fn1P11276 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Fn1P11276 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Fn1P11276 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC9.46□□□□□ -0.9
Fn1P11276 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC9.46□□□□□ -0.9
Fn1P11276 Gm16459-201ENSMUST00000121443 686 ntBASIC9.46□□□□□ -0.9
Fn1P11276 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC9.46□□□□□ -0.9
Fn1P11276 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Fn1P11276 Gm4462-201ENSMUST00000166453 492 ntBASIC9.46□□□□□ -0.9
Fn1P11276 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.46□□□□□ -0.9
Fn1P11276 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Fn1P11276 Mir6953-201ENSMUST00000184745 68 ntBASIC9.46□□□□□ -0.9
Fn1P11276 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.46□□□□□ -0.9
Fn1P11276 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC9.46□□□□□ -0.9
Fn1P11276 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.46□□□□□ -0.9
Fn1P11276 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Gm5705-201ENSMUST00000066241 711 ntBASIC9.46□□□□□ -0.9
Fn1P11276 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Fn1P11276 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
Fn1P11276 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.46□□□□□ -0.9
Fn1P11276 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms