Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Col1a1P11087 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col1a1P11087 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col1a1P11087 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col1a1P11087 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col1a1P11087 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.35□□□□□ -0.11
Col1a1P11087 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.35□□□□□ -0.11
Col1a1P11087 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col1a1P11087 Gm25076-201ENSMUST00000104098 132 ntBASIC14.35□□□□□ -0.11
Col1a1P11087 Gm13937-201ENSMUST00000121000 988 ntBASIC14.35□□□□□ -0.11
Col1a1P11087 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col1a1P11087 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC14.35□□□□□ -0.11
Col1a1P11087 Gm24844-201ENSMUST00000158679 127 ntBASIC14.35□□□□□ -0.11
Col1a1P11087 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col1a1P11087 Gm38117-201ENSMUST00000194653 939 ntBASIC14.35□□□□□ -0.11
Col1a1P11087 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC14.35□□□□□ -0.11
Col1a1P11087 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.35□□□□□ -0.11
Col1a1P11087 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col1a1P11087 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col1a1P11087 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col1a1P11087 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
Col1a1P11087 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.35□□□□□ -0.11
Col1a1P11087 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col1a1P11087 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.34□□□□□ -0.11
Col1a1P11087 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.34□□□□□ -0.11
Col1a1P11087 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col1a1P11087 Gm26013-201ENSMUST00000104404 119 ntBASIC14.34□□□□□ -0.11
Col1a1P11087 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col1a1P11087 Gm13600-201ENSMUST00000117949 744 ntBASIC14.34□□□□□ -0.11
Col1a1P11087 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col1a1P11087 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC14.34□□□□□ -0.11
Col1a1P11087 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col1a1P11087 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Col1a1P11087 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.34□□□□□ -0.11
Col1a1P11087 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.34□□□□□ -0.11
Col1a1P11087 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Col1a1P11087 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.34□□□□□ -0.11
Col1a1P11087 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col1a1P11087 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col1a1P11087 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Col1a1P11087 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col1a1P11087 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col1a1P11087 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Col1a1P11087 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col1a1P11087 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col1a1P11087 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC14.33□□□□□ -0.12
Col1a1P11087 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.33□□□□□ -0.12
Col1a1P11087 Gm44506-201ENSMUST00000206278 965 ntBASIC14.33□□□□□ -0.12
Col1a1P11087 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC14.33□□□□□ -0.12
Col1a1P11087 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.33□□□□□ -0.12
Col1a1P11087 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.33□□□□□ -0.12
Col1a1P11087 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.33□□□□□ -0.12
Col1a1P11087 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.33□□□□□ -0.12
Col1a1P11087 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.33□□□□□ -0.12
Col1a1P11087 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Col1a1P11087 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.33□□□□□ -0.12
Col1a1P11087 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col1a1P11087 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col1a1P11087 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.32□□□□□ -0.12
Col1a1P11087 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms