Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Gm44492-201ENSMUST00000197012 141 ntBASIC8.48□□□□□ -1.05
Smim1P0C8K7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Gm37333-201ENSMUST00000192904 2251 ntBASIC8.48□□□□□ -1.05
Smim1P0C8K7 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC8.48□□□□□ -1.05
Smim1P0C8K7 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Gm38194-201ENSMUST00000194529 2211 ntBASIC8.48□□□□□ -1.05
Smim1P0C8K7 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Gm45089-201ENSMUST00000208082 2040 ntBASIC8.47□□□□□ -1.05
Smim1P0C8K7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC8.47□□□□□ -1.05
Smim1P0C8K7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC8.47□□□□□ -1.05
Smim1P0C8K7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Gm11025-201ENSMUST00000140773 466 ntBASIC8.47□□□□□ -1.05
Smim1P0C8K7 Gm18766-201ENSMUST00000189811 808 ntBASIC8.47□□□□□ -1.05
Smim1P0C8K7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC8.47□□□□□ -1.05
Smim1P0C8K7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Gm21939-201ENSMUST00000221137 2773 ntBASIC8.47□□□□□ -1.05
Smim1P0C8K7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Smim1P0C8K7 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Smim1P0C8K7 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Smim1P0C8K7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC8.46□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms