Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp6P0C0A3 Daam2-202ENSMUST00000224595 1926 ntBASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp6P0C0A3 Mir1247-201ENSMUST00000116706 82 ntBASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Gm15370-201ENSMUST00000117158 253 ntBASIC13.52□□□□□ -0.25
Chmp6P0C0A3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Mospd4-201ENSMUST00000180618 576 ntBASIC13.52□□□□□ -0.25
Chmp6P0C0A3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Gm38158-201ENSMUST00000194617 339 ntBASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp6P0C0A3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Gm24548-201ENSMUST00000158650 108 ntBASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Olfr284-202ENSMUST00000206647 966 ntBASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Gm6007-201ENSMUST00000208170 823 ntBASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Gm45331-201ENSMUST00000209868 554 ntBASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp6P0C0A3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Gm10434-201ENSMUST00000101158 471 ntBASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp6P0C0A3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms