Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC18.4■□□□□ 0.54
NclP09405 Gm24749-201ENSMUST00000157838 343 ntBASIC18.4■□□□□ 0.54
NclP09405 Gm23119-201ENSMUST00000158610 140 ntBASIC18.4■□□□□ 0.54
NclP09405 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC18.4■□□□□ 0.54
NclP09405 Nsd1-205ENSMUST00000224693 852 ntBASIC18.4■□□□□ 0.54
NclP09405 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC18.4■□□□□ 0.54
NclP09405 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 Gm9333-201ENSMUST00000205452 1323 ntBASIC18.4■□□□□ 0.54
NclP09405 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC18.39■□□□□ 0.54
NclP09405 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NclP09405 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NclP09405 Gm24934-201ENSMUST00000103764 111 ntBASIC18.39■□□□□ 0.53
NclP09405 Gm9083-201ENSMUST00000120423 819 ntBASIC18.39■□□□□ 0.53
NclP09405 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
NclP09405 Gm45003-201ENSMUST00000205875 2158 ntBASIC18.39■□□□□ 0.53
NclP09405 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC18.39■□□□□ 0.53
NclP09405 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 Gm5884-201ENSMUST00000036712 1479 ntBASIC18.39■□□□□ 0.53
NclP09405 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NclP09405 Gm43045-201ENSMUST00000198725 2095 ntBASIC18.38■□□□□ 0.53
NclP09405 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NclP09405 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC18.38■□□□□ 0.53
NclP09405 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Gm26616-202ENSMUST00000195676 3107 ntBASIC18.38■□□□□ 0.53
NclP09405 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NclP09405 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NclP09405 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Gm7003-201ENSMUST00000195089 312 ntBASIC18.38■□□□□ 0.53
NclP09405 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NclP09405 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NclP09405 CU062626.3-201ENSMUST00000225522 1411 ntBASIC18.38■□□□□ 0.53
NclP09405 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NclP09405 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NclP09405 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NclP09405 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NclP09405 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Gm37437-201ENSMUST00000194451 1937 ntBASIC18.37■□□□□ 0.53
NclP09405 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC18.37■□□□□ 0.53
NclP09405 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 AC241621.2-201ENSMUST00000223991 2151 ntBASIC18.37■□□□□ 0.53
NclP09405 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC18.37■□□□□ 0.53
NclP09405 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC18.37■□□□□ 0.53
NclP09405 Gm14760-201ENSMUST00000121831 999 ntBASIC18.37■□□□□ 0.53
NclP09405 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC18.37■□□□□ 0.53
NclP09405 Gm29615-201ENSMUST00000185371 697 ntBASIC18.37■□□□□ 0.53
NclP09405 Gm28224-201ENSMUST00000186078 697 ntBASIC18.37■□□□□ 0.53
NclP09405 Gm29001-201ENSMUST00000186177 697 ntBASIC18.37■□□□□ 0.53
NclP09405 Gm28292-201ENSMUST00000186593 697 ntBASIC18.37■□□□□ 0.53
NclP09405 Gm28101-201ENSMUST00000187608 697 ntBASIC18.37■□□□□ 0.53
NclP09405 Gm29076-201ENSMUST00000187689 697 ntBASIC18.37■□□□□ 0.53
NclP09405 Gm28302-201ENSMUST00000187931 697 ntBASIC18.37■□□□□ 0.53
NclP09405 Gm28646-201ENSMUST00000188220 697 ntBASIC18.37■□□□□ 0.53
NclP09405 Gm28205-201ENSMUST00000189177 697 ntBASIC18.37■□□□□ 0.53
NclP09405 Gm29032-201ENSMUST00000189797 697 ntBASIC18.37■□□□□ 0.53
NclP09405 Gm28695-201ENSMUST00000190300 697 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms