Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.22□□□□□ -0.45
Hoxa4P06798 Rprl1-202ENSMUST00000198476 238 ntBASIC12.22□□□□□ -0.45
Hoxa4P06798 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.22□□□□□ -0.45
Hoxa4P06798 Gm9257-201ENSMUST00000221254 232 ntBASIC12.22□□□□□ -0.45
Hoxa4P06798 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hoxa4P06798 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Hoxa4P06798 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.22□□□□□ -0.45
Hoxa4P06798 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Hoxa4P06798 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Hoxa4P06798 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa4P06798 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Hoxa4P06798 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hoxa4P06798 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Hoxa4P06798 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hoxa4P06798 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.21□□□□□ -0.45
Hoxa4P06798 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hoxa4P06798 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.21□□□□□ -0.45
Hoxa4P06798 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hoxa4P06798 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.21□□□□□ -0.45
Hoxa4P06798 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.21□□□□□ -0.45
Hoxa4P06798 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Gm27390-201ENSMUST00000184516 176 ntBASIC12.21□□□□□ -0.45
Hoxa4P06798 Gm4034-201ENSMUST00000187674 480 ntBASIC12.21□□□□□ -0.45
Hoxa4P06798 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.21□□□□□ -0.45
Hoxa4P06798 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.21□□□□□ -0.45
Hoxa4P06798 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Hoxa4P06798 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.21□□□□□ -0.45
Hoxa4P06798 Gm6082-201ENSMUST00000215204 454 ntBASIC12.21□□□□□ -0.45
Hoxa4P06798 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.21□□□□□ -0.45
Hoxa4P06798 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.21□□□□□ -0.45
Hoxa4P06798 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Hoxa4P06798 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa4P06798 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Hoxa4P06798 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa4P06798 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa4P06798 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa4P06798 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Hoxa4P06798 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.46
Hoxa4P06798 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Hoxa4P06798 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa4P06798 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa4P06798 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.2□□□□□ -0.46
Hoxa4P06798 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.2□□□□□ -0.46
Hoxa4P06798 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm26083-201ENSMUST00000157904 193 ntBASIC12.2□□□□□ -0.46
Hoxa4P06798 Rprl1-201ENSMUST00000158050 327 ntBASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxa4P06798 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm32999-201ENSMUST00000192693 562 ntBASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm44967-201ENSMUST00000207047 631 ntBASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxa4P06798 Gm45598-202ENSMUST00000210719 986 ntBASIC12.2□□□□□ -0.46
Hoxa4P06798 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.2□□□□□ -0.46
Hoxa4P06798 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa4P06798 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 302.7 ms