Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.09□□□□□ -0.63
CcnkO88874 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CcnkO88874 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CcnkO88874 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.09□□□□□ -0.63
CcnkO88874 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.09□□□□□ -0.63
CcnkO88874 Gm6152-201ENSMUST00000151704 340 ntBASIC11.09□□□□□ -0.63
CcnkO88874 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CcnkO88874 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
CcnkO88874 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.09□□□□□ -0.63
CcnkO88874 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CcnkO88874 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcnkO88874 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcnkO88874 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcnkO88874 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcnkO88874 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CcnkO88874 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
CcnkO88874 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcnkO88874 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcnkO88874 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CcnkO88874 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcnkO88874 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.09□□□□□ -0.63
CcnkO88874 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CcnkO88874 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcnkO88874 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcnkO88874 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
CcnkO88874 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.08□□□□□ -0.64
CcnkO88874 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.08□□□□□ -0.64
CcnkO88874 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
CcnkO88874 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.08□□□□□ -0.64
CcnkO88874 Gm12091-201ENSMUST00000146791 830 ntBASIC11.08□□□□□ -0.64
CcnkO88874 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.08□□□□□ -0.64
CcnkO88874 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.08□□□□□ -0.64
CcnkO88874 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Gm8463-201ENSMUST00000208573 613 ntBASIC11.08□□□□□ -0.64
CcnkO88874 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.08□□□□□ -0.64
CcnkO88874 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CcnkO88874 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
CcnkO88874 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.08□□□□□ -0.64
CcnkO88874 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
CcnkO88874 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcnkO88874 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CcnkO88874 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.07□□□□□ -0.64
CcnkO88874 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.07□□□□□ -0.64
CcnkO88874 Gm14928-201ENSMUST00000120198 477 ntBASIC11.07□□□□□ -0.64
CcnkO88874 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.07□□□□□ -0.64
CcnkO88874 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.07□□□□□ -0.64
CcnkO88874 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.07□□□□□ -0.64
CcnkO88874 Gm44069-201ENSMUST00000204898 506 ntBASIC11.07□□□□□ -0.64
CcnkO88874 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.07□□□□□ -0.64
CcnkO88874 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.07□□□□□ -0.64
CcnkO88874 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.07□□□□□ -0.64
CcnkO88874 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.07□□□□□ -0.64
CcnkO88874 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Gm6180-201ENSMUST00000065243 498 ntBASIC11.07□□□□□ -0.64
CcnkO88874 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.07□□□□□ -0.64
CcnkO88874 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CcnkO88874 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CcnkO88874 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms