Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.44□□□□□ -0.58
Cops4O88544 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.44□□□□□ -0.58
Cops4O88544 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cops4O88544 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cops4O88544 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.44□□□□□ -0.58
Cops4O88544 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Cops4O88544 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cops4O88544 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.44□□□□□ -0.58
Cops4O88544 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.44□□□□□ -0.58
Cops4O88544 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cops4O88544 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.44□□□□□ -0.58
Cops4O88544 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.44□□□□□ -0.58
Cops4O88544 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.44□□□□□ -0.58
Cops4O88544 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.44□□□□□ -0.58
Cops4O88544 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.44□□□□□ -0.58
Cops4O88544 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.44□□□□□ -0.58
Cops4O88544 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.44□□□□□ -0.58
Cops4O88544 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Mir339-201ENSMUST00000083659 96 ntBASIC11.44□□□□□ -0.58
Cops4O88544 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cops4O88544 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.43□□□□□ -0.58
Cops4O88544 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.43□□□□□ -0.58
Cops4O88544 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cops4O88544 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.43□□□□□ -0.58
Cops4O88544 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cops4O88544 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.43□□□□□ -0.58
Cops4O88544 Gm14760-201ENSMUST00000121831 999 ntBASIC11.43□□□□□ -0.58
Cops4O88544 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.43□□□□□ -0.58
Cops4O88544 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.43□□□□□ -0.58
Cops4O88544 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Cops4O88544 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.43□□□□□ -0.58
Cops4O88544 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.43□□□□□ -0.58
Cops4O88544 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.43□□□□□ -0.58
Cops4O88544 Gm16372-201ENSMUST00000073088 450 ntBASIC11.43□□□□□ -0.58
Cops4O88544 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.43□□□□□ -0.58
Cops4O88544 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cops4O88544 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cops4O88544 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cops4O88544 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Cops4O88544 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms