Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.63□□□□□ -0.23
Trdmt1O55055 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.62□□□□□ -0.23
Trdmt1O55055 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.62□□□□□ -0.23
Trdmt1O55055 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.62□□□□□ -0.23
Trdmt1O55055 Mir7686-201ENSMUST00000200604 57 ntBASIC13.62□□□□□ -0.23
Trdmt1O55055 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.62□□□□□ -0.23
Trdmt1O55055 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trdmt1O55055 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.62□□□□□ -0.23
Trdmt1O55055 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trdmt1O55055 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Trdmt1O55055 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.61□□□□□ -0.23
Trdmt1O55055 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Gm13809-201ENSMUST00000117921 597 ntBASIC13.61□□□□□ -0.23
Trdmt1O55055 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.61□□□□□ -0.23
Trdmt1O55055 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.61□□□□□ -0.23
Trdmt1O55055 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.61□□□□□ -0.23
Trdmt1O55055 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.61□□□□□ -0.23
Trdmt1O55055 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trdmt1O55055 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trdmt1O55055 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.6□□□□□ -0.23
Trdmt1O55055 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms