Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.49□□□□□ -0.73
Cxcl13O55038 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.49□□□□□ -0.73
Cxcl13O55038 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.49□□□□□ -0.73
Cxcl13O55038 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.49□□□□□ -0.73
Cxcl13O55038 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.49□□□□□ -0.73
Cxcl13O55038 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cxcl13O55038 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cxcl13O55038 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cxcl13O55038 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.48□□□□□ -0.73
Cxcl13O55038 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cxcl13O55038 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.48□□□□□ -0.73
Cxcl13O55038 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cxcl13O55038 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cxcl13O55038 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.48□□□□□ -0.73
Cxcl13O55038 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Cxcl13O55038 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.48□□□□□ -0.73
Cxcl13O55038 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.48□□□□□ -0.73
Cxcl13O55038 Mir5120-201ENSMUST00000175020 78 ntBASIC10.48□□□□□ -0.73
Cxcl13O55038 Gm37666-201ENSMUST00000194110 866 ntBASIC10.48□□□□□ -0.73
Cxcl13O55038 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.48□□□□□ -0.73
Cxcl13O55038 AY036118-201ENSMUST00000200021 923 ntBASIC10.48□□□□□ -0.73
Cxcl13O55038 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.48□□□□□ -0.73
Cxcl13O55038 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.48□□□□□ -0.73
Cxcl13O55038 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cxcl13O55038 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cxcl13O55038 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cxcl13O55038 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Gm23200-201ENSMUST00000104379 132 ntBASIC10.47□□□□□ -0.73
Cxcl13O55038 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Cxcl13O55038 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
Cxcl13O55038 Gm25732-201ENSMUST00000175168 60 ntBASIC10.47□□□□□ -0.73
Cxcl13O55038 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.47□□□□□ -0.73
Cxcl13O55038 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.47□□□□□ -0.73
Cxcl13O55038 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.47□□□□□ -0.73
Cxcl13O55038 Nsd1-205ENSMUST00000224693 852 ntBASIC10.47□□□□□ -0.73
Cxcl13O55038 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cxcl13O55038 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.47□□□□□ -0.73
Cxcl13O55038 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cxcl13O55038 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms