Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Smarce1O54941 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarce1O54941 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.73□□□□□ -0.05
Smarce1O54941 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarce1O54941 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarce1O54941 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarce1O54941 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarce1O54941 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarce1O54941 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
Smarce1O54941 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.72□□□□□ -0.05
Smarce1O54941 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.72□□□□□ -0.05
Smarce1O54941 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Smarce1O54941 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Smarce1O54941 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Smarce1O54941 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Paupar-201ENSMUST00000194826 3482 ntBASIC14.72□□□□□ -0.05
Smarce1O54941 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.72□□□□□ -0.05
Smarce1O54941 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Smarce1O54941 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Smarce1O54941 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.72□□□□□ -0.05
Smarce1O54941 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Gm8018-201ENSMUST00000173536 789 ntBASIC14.72□□□□□ -0.05
Smarce1O54941 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.72□□□□□ -0.05
Smarce1O54941 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Map1b-203ENSMUST00000223725 2669 ntBASIC14.72□□□□□ -0.05
Smarce1O54941 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Smarce1O54941 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarce1O54941 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.71□□□□□ -0.05
Smarce1O54941 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.71□□□□□ -0.05
Smarce1O54941 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Smarce1O54941 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.71□□□□□ -0.05
Smarce1O54941 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.71□□□□□ -0.05
Smarce1O54941 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Gm4034-201ENSMUST00000187674 480 ntBASIC14.71□□□□□ -0.05
Smarce1O54941 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.71□□□□□ -0.05
Smarce1O54941 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.71□□□□□ -0.05
Smarce1O54941 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.71□□□□□ -0.05
Smarce1O54941 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.71□□□□□ -0.05
Smarce1O54941 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
Smarce1O54941 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.71□□□□□ -0.05
Smarce1O54941 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarce1O54941 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.71□□□□□ -0.06
Smarce1O54941 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.71□□□□□ -0.06
Smarce1O54941 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarce1O54941 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarce1O54941 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarce1O54941 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Smarce1O54941 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.71□□□□□ -0.06
Smarce1O54941 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Smarce1O54941 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms