Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Npc1O35604 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.12□□□□□ -0.47
Npc1O35604 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Npc1O35604 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.12□□□□□ -0.47
Npc1O35604 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.12□□□□□ -0.47
Npc1O35604 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.12□□□□□ -0.47
Npc1O35604 Gm5950-201ENSMUST00000213337 772 ntBASIC12.12□□□□□ -0.47
Npc1O35604 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.12□□□□□ -0.47
Npc1O35604 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Npc1O35604 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Npc1O35604 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.11□□□□□ -0.47
Npc1O35604 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Npc1O35604 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.11□□□□□ -0.47
Npc1O35604 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Npc1O35604 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Gm11531-201ENSMUST00000117614 555 ntBASIC12.11□□□□□ -0.47
Npc1O35604 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.11□□□□□ -0.47
Npc1O35604 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.11□□□□□ -0.47
Npc1O35604 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.11□□□□□ -0.47
Npc1O35604 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Npc1O35604 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npc1O35604 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.1□□□□□ -0.47
Npc1O35604 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Npc1O35604 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.1□□□□□ -0.47
Npc1O35604 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.1□□□□□ -0.47
Npc1O35604 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Npc1O35604 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Gm11930-201ENSMUST00000117788 190 ntBASIC12.1□□□□□ -0.47
Npc1O35604 Gm15547-201ENSMUST00000122152 333 ntBASIC12.1□□□□□ -0.47
Npc1O35604 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.1□□□□□ -0.47
Npc1O35604 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Rmrp-201ENSMUST00000157463 271 ntBASIC12.1□□□□□ -0.47
Npc1O35604 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.1□□□□□ -0.47
Npc1O35604 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.1□□□□□ -0.47
Npc1O35604 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.1□□□□□ -0.47
Npc1O35604 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.1□□□□□ -0.47
Npc1O35604 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Npc1O35604 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.1□□□□□ -0.47
Npc1O35604 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.1□□□□□ -0.47
Npc1O35604 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Npc1O35604 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.1□□□□□ -0.47
Npc1O35604 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms