Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Gm13809-201ENSMUST00000117921 597 ntBASIC14.93□□□□□ -0.02
NpcdF8VQB8 Gm12899-201ENSMUST00000120565 551 ntBASIC14.93□□□□□ -0.02
NpcdF8VQB8 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.93□□□□□ -0.02
NpcdF8VQB8 Gm25545-201ENSMUST00000122673 323 ntBASIC14.93□□□□□ -0.02
NpcdF8VQB8 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
NpcdF8VQB8 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Gm8100-201ENSMUST00000182906 988 ntBASIC14.93□□□□□ -0.02
NpcdF8VQB8 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.93□□□□□ -0.02
NpcdF8VQB8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NpcdF8VQB8 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.92□□□□□ -0.02
NpcdF8VQB8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.92□□□□□ -0.02
NpcdF8VQB8 Gm9996-201ENSMUST00000070359 913 ntBASIC14.92□□□□□ -0.02
NpcdF8VQB8 Gm26448-201ENSMUST00000082446 203 ntBASIC14.92□□□□□ -0.02
NpcdF8VQB8 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NpcdF8VQB8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NpcdF8VQB8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.91□□□□□ -0.02
NpcdF8VQB8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NpcdF8VQB8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NpcdF8VQB8 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NpcdF8VQB8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NpcdF8VQB8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
NpcdF8VQB8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NpcdF8VQB8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NpcdF8VQB8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NpcdF8VQB8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NpcdF8VQB8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NpcdF8VQB8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms