Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Gm25927-201ENSMUST00000175058 117 ntBASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Gm24136-201ENSMUST00000083374 165 ntBASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gm11918-201ENSMUST00000121660 179 ntBASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gm23984-201ENSMUST00000157139 203 ntBASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gm28911-201ENSMUST00000188837 117 ntBASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gm38092-201ENSMUST00000195600 653 ntBASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gm37497-201ENSMUST00000195830 798 ntBASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gm6745-201ENSMUST00000199216 526 ntBASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gm38671-201ENSMUST00000200573 130 ntBASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gm32025-201ENSMUST00000217960 307 ntBASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh1F7BJK1 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Gm14928-201ENSMUST00000120198 477 ntBASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Gm44882-201ENSMUST00000205702 802 ntBASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Gm6180-201ENSMUST00000065243 498 ntBASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms