Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.84□□□□□ -0.03
Ube4aE9Q735 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.84□□□□□ -0.03
Ube4aE9Q735 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Gm24891-201ENSMUST00000104391 136 ntBASIC14.84□□□□□ -0.03
Ube4aE9Q735 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Gm2965-201ENSMUST00000198365 343 ntBASIC14.84□□□□□ -0.03
Ube4aE9Q735 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.84□□□□□ -0.03
Ube4aE9Q735 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube4aE9Q735 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube4aE9Q735 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Ube4aE9Q735 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube4aE9Q735 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ube4aE9Q735 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.83□□□□□ -0.03
Ube4aE9Q735 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube4aE9Q735 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ube4aE9Q735 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Gm8566-201ENSMUST00000120174 465 ntBASIC14.83□□□□□ -0.04
Ube4aE9Q735 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.83□□□□□ -0.04
Ube4aE9Q735 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Gm27530-201ENSMUST00000184096 98 ntBASIC14.83□□□□□ -0.04
Ube4aE9Q735 Gm7467-201ENSMUST00000185173 652 ntBASIC14.83□□□□□ -0.04
Ube4aE9Q735 Gm3508-201ENSMUST00000186012 792 ntBASIC14.83□□□□□ -0.04
Ube4aE9Q735 Gm37246-201ENSMUST00000192665 835 ntBASIC14.83□□□□□ -0.04
Ube4aE9Q735 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Gm8956-201ENSMUST00000203939 825 ntBASIC14.83□□□□□ -0.04
Ube4aE9Q735 Gm45770-201ENSMUST00000212105 616 ntBASIC14.83□□□□□ -0.04
Ube4aE9Q735 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.83□□□□□ -0.04
Ube4aE9Q735 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.83□□□□□ -0.04
Ube4aE9Q735 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Ube4aE9Q735 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
Ube4aE9Q735 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.82□□□□□ -0.04
Ube4aE9Q735 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms