Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Gm11989-201ENSMUST00000117240 672 ntBASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Gm11362-201ENSMUST00000118838 850 ntBASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Gm8913-201ENSMUST00000209491 641 ntBASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Pcdhb9E9Q5G2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Gm29199-201ENSMUST00000187766 775 ntBASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb9E9Q5G2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms