Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pcdh17E9PXF0 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.58□□□□□ -0.55
Pcdh17E9PXF0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pcdh17E9PXF0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Gm14999-201ENSMUST00000121039 624 ntBASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Gm27341-201ENSMUST00000183570 106 ntBASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Gm18753-201ENSMUST00000201000 566 ntBASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh17E9PXF0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Gm14028-201ENSMUST00000117434 479 ntBASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Gm25700-201ENSMUST00000177693 110 ntBASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms