Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Gm12566-201ENSMUST00000121479 359 ntBASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Gm24749-201ENSMUST00000157838 343 ntBASIC12.26□□□□□ -0.45
Srp54bE9PXC0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Gm9022-201ENSMUST00000182482 992 ntBASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Gm9230-201ENSMUST00000188228 532 ntBASIC12.26□□□□□ -0.45
Srp54bE9PXC0 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Srp54bE9PXC0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Gm24231-201ENSMUST00000104315 133 ntBASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srp54bE9PXC0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm23200-201ENSMUST00000104379 132 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms