Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm4986-201ENSMUST00000119731 549 ntBASIC12.11□□□□□ -0.47
Clip3B9EHT4 Gm13786-201ENSMUST00000122371 333 ntBASIC12.11□□□□□ -0.47
Clip3B9EHT4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.11□□□□□ -0.47
Clip3B9EHT4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.11□□□□□ -0.47
Clip3B9EHT4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Gm8099-201ENSMUST00000200510 742 ntBASIC12.11□□□□□ -0.47
Clip3B9EHT4 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Gm9257-201ENSMUST00000221254 232 ntBASIC12.11□□□□□ -0.47
Clip3B9EHT4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.11□□□□□ -0.47
Clip3B9EHT4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.11□□□□□ -0.47
Clip3B9EHT4 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.11□□□□□ -0.47
Clip3B9EHT4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.1□□□□□ -0.47
Clip3B9EHT4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.1□□□□□ -0.47
Clip3B9EHT4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.1□□□□□ -0.47
Clip3B9EHT4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.1□□□□□ -0.47
Clip3B9EHT4 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.1□□□□□ -0.47
Clip3B9EHT4 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Gm10434-201ENSMUST00000101158 471 ntBASIC12.1□□□□□ -0.47
Clip3B9EHT4 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Gm45865-201ENSMUST00000211815 945 ntBASIC12.1□□□□□ -0.47
Clip3B9EHT4 Gm8227-201ENSMUST00000223306 571 ntBASIC12.1□□□□□ -0.47
Clip3B9EHT4 Cts7-204ENSMUST00000225321 1257 ntBASIC12.1□□□□□ -0.47
Clip3B9EHT4 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.1□□□□□ -0.47
Clip3B9EHT4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.1□□□□□ -0.47
Clip3B9EHT4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip3B9EHT4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip3B9EHT4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms