Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gm11594-201ENSMUST00000122313 162 ntBASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gm16372-201ENSMUST00000073088 450 ntBASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.01□□□□□ -0.81
Gm12887B1AVM1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10□□□□□ -0.81
Gm12887B1AVM1 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 AC151286.1-201ENSMUST00000198489 145 ntBASIC10□□□□□ -0.81
Gm12887B1AVM1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10□□□□□ -0.81
Gm12887B1AVM1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Gm8396-201ENSMUST00000057361 823 ntBASIC10□□□□□ -0.81
Gm12887B1AVM1 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Gm43102-201ENSMUST00000201004 2324 ntBASIC10□□□□□ -0.81
Gm12887B1AVM1 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Gm38049-201ENSMUST00000195698 1372 ntBASIC10□□□□□ -0.81
Gm12887B1AVM1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms