Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Gm38058-201ENSMUST00000194323 4368 ntBASIC9.97□□□□□ -0.81
Chd6A3KFM7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Gm16296-201ENSMUST00000159905 325 ntBASIC9.97□□□□□ -0.81
Chd6A3KFM7 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Chd6A3KFM7 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 CT571245.2-201ENSMUST00000218421 305 ntBASIC9.97□□□□□ -0.81
Chd6A3KFM7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.97□□□□□ -0.81
Chd6A3KFM7 AC122346.3-201ENSMUST00000223983 306 ntBASIC9.97□□□□□ -0.81
Chd6A3KFM7 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Chd6A3KFM7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Chd6A3KFM7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Chd6A3KFM7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Chd6A3KFM7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Chd6A3KFM7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Chd6A3KFM7 Gm12461-201ENSMUST00000120231 1239 ntBASIC9.96□□□□□ -0.81
Chd6A3KFM7 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
Chd6A3KFM7 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC9.96□□□□□ -0.81
Chd6A3KFM7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.96□□□□□ -0.81
Chd6A3KFM7 Ighv1-70-201ENSMUST00000196509 351 ntBASIC9.96□□□□□ -0.81
Chd6A3KFM7 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC9.96□□□□□ -0.81
Chd6A3KFM7 Gm43106-201ENSMUST00000199485 637 ntBASIC9.96□□□□□ -0.81
Chd6A3KFM7 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC9.96□□□□□ -0.81
Chd6A3KFM7 CT025603.1-201ENSMUST00000224040 448 ntBASIC9.96□□□□□ -0.81
Chd6A3KFM7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Chd6A3KFM7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Chd6A3KFM7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Chd6A3KFM7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Chd6A3KFM7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Gm23132-201ENSMUST00000104254 132 ntBASIC9.96□□□□□ -0.82
Chd6A3KFM7 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Gm22379-201ENSMUST00000157480 131 ntBASIC9.96□□□□□ -0.82
Chd6A3KFM7 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.96□□□□□ -0.82
Chd6A3KFM7 Gm27149-201ENSMUST00000184716 1266 ntBASIC9.96□□□□□ -0.82
Chd6A3KFM7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC9.96□□□□□ -0.82
Chd6A3KFM7 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Chd6A3KFM7 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Gm5449-201ENSMUST00000081132 357 ntBASIC9.96□□□□□ -0.82
Chd6A3KFM7 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Chd6A3KFM7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Chd6A3KFM7 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 Gm12791-201ENSMUST00000120788 655 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 Gm14524-201ENSMUST00000121066 683 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms