Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm19184-201ENSMUST00000196798 928 ntBASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm19078-201ENSMUST00000206311 727 ntBASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms