Protein–RNA interactions for Protein: Q9Z140

Cpne6, Copine-6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne6Q9Z140 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Gm25043-201ENSMUST00000158604 212 ntBASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Gm37201-201ENSMUST00000191845 523 ntBASIC12.12□□□□□ -0.47
Cpne6Q9Z140 AA914427-201ENSMUST00000193194 1166 ntBASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Gm18753-201ENSMUST00000201000 566 ntBASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Rps4l-202ENSMUST00000204242 789 ntBASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpne6Q9Z140 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Gm14109-201ENSMUST00000118814 309 ntBASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Gm13736-201ENSMUST00000119272 253 ntBASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Gm16505-201ENSMUST00000179981 232 ntBASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Gm27023-201ENSMUST00000182372 285 ntBASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Gm2260-201ENSMUST00000184965 657 ntBASIC12.11□□□□□ -0.47
Cpne6Q9Z140 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Gm45186-201ENSMUST00000206874 478 ntBASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.11□□□□□ -0.47
Cpne6Q9Z140 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpne6Q9Z140 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne6Q9Z140 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne6Q9Z140 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne6Q9Z140 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms