Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Map1b-203ENSMUST00000223725 2669 ntBASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Gm10051-201ENSMUST00000145209 414 ntBASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Mir5120-201ENSMUST00000175020 78 ntBASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Gm18730-201ENSMUST00000218038 343 ntBASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Gm11509-201ENSMUST00000117358 325 ntBASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Gm9136-201ENSMUST00000193368 454 ntBASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Gm807-202ENSMUST00000224929 408 ntBASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn8aQ9WTU3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Scn8aQ9WTU3 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.4□□□□□ -0.43
Scn8aQ9WTU3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Scn8aQ9WTU3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Scn8aQ9WTU3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.4□□□□□ -0.43
Scn8aQ9WTU3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Scn8aQ9WTU3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Gm8199-201ENSMUST00000121323 823 ntBASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Gm27552-201ENSMUST00000183351 62 ntBASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Gm27844-201ENSMUST00000183613 62 ntBASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Gm18038-201ENSMUST00000197900 485 ntBASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Gm7848-201ENSMUST00000210739 718 ntBASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 136.2 ms