Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tubd1Q9R1K7 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tubd1Q9R1K7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tubd1Q9R1K7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubd1Q9R1K7 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Gm6963-201ENSMUST00000147879 379 ntBASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Gm9230-201ENSMUST00000188228 532 ntBASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Gm7783-201ENSMUST00000204795 781 ntBASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Gm19187-201ENSMUST00000206781 892 ntBASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubd1Q9R1K7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms