Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.9□□□□□ -0.18
AmfrQ9R049 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AmfrQ9R049 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
AmfrQ9R049 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.19
AmfrQ9R049 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
AmfrQ9R049 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
AmfrQ9R049 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
AmfrQ9R049 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.9□□□□□ -0.19
AmfrQ9R049 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.89□□□□□ -0.19
AmfrQ9R049 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Olfr284-202ENSMUST00000206647 966 ntBASIC13.89□□□□□ -0.19
AmfrQ9R049 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.89□□□□□ -0.19
AmfrQ9R049 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.89□□□□□ -0.19
AmfrQ9R049 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.89□□□□□ -0.19
AmfrQ9R049 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.89□□□□□ -0.19
AmfrQ9R049 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.89□□□□□ -0.19
AmfrQ9R049 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.89□□□□□ -0.19
AmfrQ9R049 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.89□□□□□ -0.19
AmfrQ9R049 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AmfrQ9R049 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.88□□□□□ -0.19
AmfrQ9R049 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
AmfrQ9R049 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.88□□□□□ -0.19
AmfrQ9R049 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.88□□□□□ -0.19
AmfrQ9R049 Gm23363-201ENSMUST00000175024 79 ntBASIC13.88□□□□□ -0.19
AmfrQ9R049 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.88□□□□□ -0.19
AmfrQ9R049 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
AmfrQ9R049 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
AmfrQ9R049 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.88□□□□□ -0.19
AmfrQ9R049 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.88□□□□□ -0.19
AmfrQ9R049 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.88□□□□□ -0.19
AmfrQ9R049 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.88□□□□□ -0.19
AmfrQ9R049 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AmfrQ9R049 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
AmfrQ9R049 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AmfrQ9R049 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AmfrQ9R049 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
AmfrQ9R049 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AmfrQ9R049 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AmfrQ9R049 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AmfrQ9R049 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AmfrQ9R049 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AmfrQ9R049 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.87□□□□□ -0.19
AmfrQ9R049 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.87□□□□□ -0.19
AmfrQ9R049 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
AmfrQ9R049 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AmfrQ9R049 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AmfrQ9R049 Gm13297-201ENSMUST00000120205 934 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms