Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.3□□□□□ -0.6
Clcf1Q9QZM3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Clcf1Q9QZM3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Daam2-202ENSMUST00000224595 1926 ntBASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Gm24255-201ENSMUST00000104481 128 ntBASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Gm14381-201ENSMUST00000122105 414 ntBASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Gm22058-201ENSMUST00000083393 310 ntBASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clcf1Q9QZM3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Paupar-201ENSMUST00000194826 3482 ntBASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Gm27243-201ENSMUST00000183964 521 ntBASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Clcf1Q9QZM3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Clcf1Q9QZM3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms