Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk3aQ9JKX8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Gm37259-201ENSMUST00000193903 849 ntBASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Gm10312-201ENSMUST00000078515 489 ntBASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Olfr582-201ENSMUST00000098212 960 ntBASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Upk3aQ9JKX8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Gm12015-201ENSMUST00000117065 843 ntBASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3aQ9JKX8 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms